Programmable DNA Lattices: Design Synthesis and Applications

Objective:

A key challenge to science and technology is to produce a general chemical system providing control over the structure of matter on the nanometer scale. The ability to do this will allow the design and construction of new materials with defined microscopic features. The objective of this research project is the development of programmable methods for construction of complex objects on the supramolecular (10-100 nm) scale. Our specific goals are:

á      to design and experimentally test self-assembled DNA nanostructures constructed by bottom-up assembly methods,

á      to demonstrate the capability of self-assembled DNA nanostructures to provide programmable assembly of DNA molecules into patterned structures, and

á      the application of these DNA nanostructures as superstructures for nanostructures composed of other materials.

 

The DNA nanostructures we are constructing include:

 

We are experimentally testing two major applications of these DNA lattices:

á      patterned DNA lattices in 2D will be formed (e.g.,  the patterns for a demultiplexed RAM circuit), and

á      periodic 3D DNA lattices are being applied to X-ray crystallography of otherwise non-crystalline molecules (which include a considerable percentage of all proteins) attached to the lattices.